- Contact Information -

 - About Me -




Indriyati Atmosukarto, PhD
Seattle Children's Research Institute
M/S C9S-5
1900 Ninth Avenue
Seattle, WA 98101-1309

Offices:  Paul Allen Center CSE270 (TF)
               Building 1 520 (MW)
               Met Park West 829 (Th)

Email: indria AT cs DOT washington DOT edu

My research diary

[Website last updated: September 2010]
My name is Indriyati Atmosukarto but I prefer to be called Indri. I am a Singaporean with an Indonesian father and a Romanian mother, born in Algeria and currently living in the US. I always have problems answering the "Where are you from?" question :)

Academic bio:
Indriyati Atmosukarto is currently a Postdoctoral Senior Fellow in the Department of Pediatrics, School of Medicine at the University of Washington in Seattle. She is working at the Seattle Children's Research Institute and is advised by Dr Michael Cunningham in the Center of Tissue and Cell Sciences and Dr Matthew Spetlz in the Center  for Child Health, Behavior and Development.

She earned her PhD in the Department of Computer Science and Engineering at the University of Washington ,Seattle in June 2010 and was advised by Prof Linda Shapiro.  She has obtained a Master of Science from the University of Washington in 2006 and a Master of Science from the National University of Singapore in 2002. Before that, she obtained her Bachelor in Computer Science from the National University of Singapore in 2000. She was also a research engineer at the National University of Singapore.

Her research interests are in computer vision, computer graphics, and machine learning. Her current research work is in applying computer vision and machine learning techniques to analyze and quantify 3D shapes for similarity-based retrieval and classification for general computer vision applications. Her latest research work has been in developing ways to quantify various 3D facial shape deformations in children with craniofacial disorders.

Download CV (Updated 08/31/2010).


- Journal Publications -

3D Head Shape Quantification for Infants with and without Deformational Plagiocephaly.
I. Atmosukarto, L. G. Shapiro, J. R. Starr, C. L. Heike, B. Collett, M. L. Cunningham, M. L. Speltz. In The Cleft-Palate Craniofacial Journal, 2010.

3D Object Classification using Salient Point Patterns With Application to Craniofacial Research
I. Atmosukarto , K. Wilamowska, C. Heike, L. G. Shapiro. In Pattern Recognition, 2010.





 - Conference Publications -



The Use of Genetic Programming for Learning 3D Craniofacial Shape Quantification.
I. Atmosukarto, L. G. Shapiro, C. Heike.
In International Conference on Pattern Recognition, 2010.

3D Object Retrieval Using Salient Views.
I. Atmosukarto and L. G. Shapiro.
In ACM Multimedia Information Retrieval, 2010.

Shape-Based Classification of 3D Head Data.
L.Shapiro, K. Wilamowska, I. Atmosukarto, J. Wu, C.  Heike, M. Speltz, and M. Cunningham.
In International Conference on Image Analysis and Processing, 2009.

Automatic 3D Shape Severity Quantification and Localization for Deformational Plagiocephaly.
I. Atmosukarto, L. Shapiro, M. Cunningham, and M. Speltz.
In Proc. SPIE Medical Imaging: Image Processing, 2009.

A similarity retrieval method for functional magnetic resonance imaging (fMRI) statistical maps.
R. F. Tungaraza, L. G. Shapiro, J. Guan, I. Atmosukarto, S. M. Rolfe, J. Ojemann, A. Poliakov, E. Aylward, N. M. Kleinhans, J. F. Brinkley.
In Proc. SPIE Medical Imaging: Image Processing, 2009.

A model of multimodal fusion for medical applications.
S. Yang, I. Atmosukarto, J. Franklin, J. Brinkley, D. Suciu, L. Shapiro.
In Proc. SPIE Multimedia Content Access: Algorithms and Systems III, 2009.

A Learning Approach to 3D Object Classification.
I. Atmosukarto, L. Shapiro.
In Proc. S+SSPR, 2008.

A Salient-Point Signature for 3D Object Retrieval.
I. Atmosukarto, L. G. Shapiro.
In Proc. ACM Multimedia Information Retrieval, 2008.

Global 3D Mesh Segmentation using Local Operators.
I. Atmosukarto, L. G. Shapiro.
In Proc. Eurographics 2008 Workshop on 3D Object Retrieval, 2008.

A unifiying framework for combining content-based image retrieval with relational database queries for biomedical applications.
I. Atmosukarto, R. Travillian, J. Franklin, L. Shapiro, J. Brinkley, and D. Suciu.
In Proc. Society for Imaging Informatics for Medicine Annual Meeting, 2008.

Similarity-Based Retrieval for Biomedical Applications.
L. G. Shapiro, I. Atmosukarto, H. Cho, H. J. Lin, S. Ruiz-Correa, J. Yuen.
In Case-Based Reasoning on Images and Signals, P. Perner (ed.), Spring-Verlag, Berlin, 2008, pp. 356-387.

An Interactive 3D User Interface for Bronchoscopy.
I. Atmosukarto, T.  D. Soper, E.  J. Seibel, Robb W. Glenny, and L. G. Shapiro.
In Proc. SPIE Medical Imaging : Visualization and Image Guided Procedure, 2007 - Nominrr for The Michael B. Merickel best student paper award

Interactive 3D Interface for Guiding an Ultrathin Bronchoscope.
T.  D. Soper, I. Atmosukarto, E.  J. Seibel, and Robb W. Glenny.
In Proc. UIST, 2005 (Accepted poster)

Object and Event Recognition for Aerial Surveillance.
Y. Li, I. Atmosukarto, M. Kobashi, J. Yuen and L. G. Shapiro.
In SPIE Optics and Photonics in Global Homeland Security, SPIE Defense and Security Symposium, 2005. - (invited paper).

Feature Combination and Relevance Feedback for 3D Model Retrieval.
I. Atmosukarto, W.K. Leow, and Z. Huang.
In Proc. IEEE Multimedia Modelling 2005.  (presentation slides)

3D model retrieval with morphing-based geometric and topological feature maps.
M. Yu, I. Atmosukarto, W.K. Leow, Z. Huang, and R. Xu.
In Proc. IEEE Computer Vision and Pattern Recognition, 2003, 2:656-661.

Reconstructing surface discontinuities by intersecting tangent planes of advancing mesh frontiers.
L. Zhou, I. Atmosukarto, W. K. Leow, and Z. Huang.
In Proc.Computer Graphics International, 2002:183-2002.

Polygonizing non-uniformly distributed 3D points by advancing mesh frontiers.
I. Atmosukarto, L. Zhou, W. K. Leow, Z. Huang.
In  Proc.Computer Graphics International, 2001:175-182.

Acquiring 3D models from images for multimedia systems.
W. K. Leow, Z. Huang, L. Zhou, I. Atmosukarto and Y. Zhang.
In Proc.International Conference on Multimedia Modeling,  2000: 439-449.

Mesh construction from non-uniformly distributed and noisy 3D points recovered from image sequence.
I. Atmosukarto, W. K. Leow, Z. Huang, Y. Zhang, and K. K. Sung.
In Proc. Pacific Conference on Computer Graphics and Applications, 2000:423-424.

 - In Submission -

Longitudinal, three-dimensional analysis of head shape in infants with and without deformational plagiocephaly or brachycephaly.
Collett, Heike, Atmosukarto, Starr, Cuningham, Speltz.





 - Patents -



Frontier Advancing Polygonization
Patent Publication No. US-2003-0063085-A1, 3 April 2003.
Wee Kheng Leow, Zhiyong Huang, Luping Zhou and I. Atmosukarto. 



 - Theses/Milestone Reports -



Polygonization of Noisy 3D Surface Points.
I. Atmosukarto. Honor's Thesis. School of Computing, National University of Singapore, 2000.

Frontier Advancing Delaunay Triangulation of unorganized 3D points.
I. Atmosukarto.Master's Thesis. School of Computing, National University of Singapore, 2000.

Interactive 3D User Interface for Bronchosopy.
I. Atmosukarto.  PhD qualifier, University of Washington, 2006.

3D Shape Quantification for Retrieval and Classification.
I. Atmosukarto. Generals Thesis Proposal, University of Washington, 2008.

3D Shape Analysis for Quantification, Classification, and Retrieval
I. Atmosukarto. PhD Thesis, University of Washington, 2010.